Derived from 153 genomes: 6 from RefSeq and 147 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 147 | 204,314 | 94,738 | 74,447 | 117,266 | 191,819 | 257,405 | 522,472 |
| no_of_contigs | non-normal | 147 | 188.56 | 66.93 | 96 | 141.5 | 171 | 216 | 467 |
| longest | non-normal | 147 | 529,489 | 232,481 | 231,748 | 326,034 | 508,449 | 683,108 | 1,114,217 |
| GC_Content | normal | 147 | 44.18 | 0.12 | 43.93 | 44.09 | 44.19 | 44.25 | 44.47 |
| Completeness_Specific | non-normal | 147 | 100 | 0 | 99.99 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 147 | 0.2 | 0.22 | 0 | 0.05 | 0.1 | 0.28 | 0.81 |
| Total_Coding_Sequences | normal | 147 | 3,479 | 121.48 | 3,224 | 3,392 | 3,467 | 3,564 | 3,757 |
| Genome_Size | non-normal | 147 | 3,837,867 | 100,251 | 3,643,770 | 3,749,358 | 3,824,756 | 3,918,087 | 4,076,691 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 153 genomes including 6 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.