Derived from 204 genomes: 2 from RefSeq and 202 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 202 | 515,181 | 31,865 | 412,586 | 528,788 | 528,896 | 528,897 | 657,494 |
| no_of_contigs | non-normal | 202 | 61.17 | 15.31 | 46 | 54.25 | 57 | 61 | 161 |
| longest | non-normal | 202 | 977,015 | 31,604 | 821,380 | 974,605 | 974,610 | 986,842 | 1,339,215 |
| GC_Content | non-normal | 202 | 44 | 0 | 43.99 | 44 | 44 | 44 | 44.01 |
| Completeness_Specific | non-normal | 202 | 100 | 0 | 100 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 202 | 0.72 | 0.01 | 0.64 | 0.72 | 0.72 | 0.72 | 0.85 |
| Total_Coding_Sequences | non-normal | 202 | 5,260 | 12.08 | 5,211 | 5,258 | 5,260 | 5,263 | 5,313 |
| Genome_Size | non-normal | 202 | 5,744,751 | 8,497 | 5,706,377 | 5,744,622 | 5,745,338 | 5,746,842 | 5,779,313 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 204 genomes including 2 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.