Derived from 1,375 genomes: 4 from RefSeq and 1,371 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 1,371 | 407,989 | 215,204 | 20,513 | 264,642 | 402,444 | 466,709 | 1,102,247 |
| no_of_contigs | non-normal | 1,371 | 26.87 | 17.19 | 9 | 18 | 23 | 30 | 187 |
| longest | non-normal | 1,371 | 661,020 | 214,600 | 71,157 | 509,579 | 639,986 | 847,487 | 1,102,247 |
| GC_Content | non-normal | 1,371 | 36.4 | 0.11 | 35.99 | 36.32 | 36.41 | 36.49 | 36.71 |
| Completeness_Specific | non-normal | 1,371 | 100 | 0.01 | 99.89 | 99.99 | 100 | 100 | 100 |
| Contamination | non-normal | 1,371 | 0.06 | 0.06 | 0 | 0.02 | 0.04 | 0.08 | 0.45 |
| Total_Coding_Sequences | non-normal | 1,371 | 1,893 | 69.23 | 1,744 | 1,839 | 1,889 | 1,932 | 2,157 |
| Genome_Size | non-normal | 1,371 | 1,915,447 | 59,732 | 1,777,911 | 1,871,474 | 1,913,723 | 1,949,639 | 2,126,873 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 1,375 genomes including 4 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.