Derived from 805 genomes: 1 from RefSeq and 804 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 804 | 63,094 | 16,895 | 22,708 | 52,035 | 60,986 | 73,156 | 163,172 |
| no_of_contigs | non-normal | 804 | 172.03 | 28.78 | 37 | 155 | 172 | 188 | 277 |
| longest | non-normal | 804 | 188,604 | 43,026 | 66,727 | 159,803 | 188,853 | 212,739 | 410,641 |
| GC_Content | non-normal | 804 | 39.78 | 0.08 | 39.24 | 39.73 | 39.78 | 39.83 | 40.09 |
| Completeness_Specific | non-normal | 804 | 100 | 0.01 | 99.97 | 99.99 | 100 | 100 | 100 |
| Contamination | non-normal | 804 | 0.14 | 0.13 | 0 | 0.08 | 0.13 | 0.18 | 2.57 |
| Total_Coding_Sequences | non-normal | 804 | 2,293 | 69.2 | 1,852 | 2,261 | 2,301 | 2,335 | 2,458 |
| Genome_Size | non-normal | 804 | 2,223,851 | 46,210 | 1,930,278 | 2,202,108 | 2,228,741 | 2,249,978 | 2,372,629 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 805 genomes including 1 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.