Derived from 114 genomes: 6 from RefSeq and 108 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 108 | 213,701 | 146,564 | 55,164 | 114,024 | 163,151 | 274,815 | 644,915 |
| no_of_contigs | normal | 108 | 40.34 | 16.86 | 11 | 28 | 40 | 53 | 85 |
| longest | non-normal | 108 | 463,027 | 192,706 | 169,026 | 317,417 | 457,567 | 553,993 | 1,014,293 |
| GC_Content | non-normal | 108 | 41.75 | 0.24 | 41.29 | 41.53 | 41.79 | 41.97 | 42.2 |
| Completeness_Specific | non-normal | 108 | 100 | 0 | 99.99 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 108 | 0.02 | 0.02 | 0 | 0 | 0.01 | 0.02 | 0.09 |
| Total_Coding_Sequences | non-normal | 108 | 2,043 | 65.33 | 1,902 | 1,998 | 2,033 | 2,090 | 2,169 |
| Genome_Size | normal | 108 | 2,158,269 | 61,359 | 2,002,655 | 2,114,868 | 2,157,231 | 2,205,896 | 2,271,871 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 114 genomes including 6 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.