Derived from 119 genomes: 6 from RefSeq and 113 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 113 | 121,045 | 44,009 | 38,898 | 91,262 | 103,510 | 155,511 | 230,759 |
| no_of_contigs | non-normal | 113 | 69.4 | 20.97 | 42 | 56 | 63 | 76 | 144 |
| longest | non-normal | 113 | 257,370 | 78,719 | 122,547 | 192,586 | 234,430 | 276,962 | 453,209 |
| GC_Content | normal | 113 | 39.61 | 0.08 | 39.42 | 39.56 | 39.59 | 39.66 | 39.78 |
| Completeness_Specific | non-normal | 113 | 100 | 0 | 100 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 113 | 0.29 | 0.13 | 0.13 | 0.21 | 0.26 | 0.32 | 1.05 |
| Total_Coding_Sequences | non-normal | 113 | 2,003 | 117.34 | 1,788 | 1,915 | 1,974 | 2,092 | 2,245 |
| Genome_Size | non-normal | 113 | 2,076,638 | 93,441 | 1,874,202 | 2,014,533 | 2,057,222 | 2,139,907 | 2,264,288 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 119 genomes including 6 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.