Serratia nematodiphila is a Gram-negative, facultatively anaerobic rod in the family Yersiniaceae, originally isolated from the entomopathogenic nematode Heterorhabditidoides chongmingensis. It forms a symbiotic association with its nematode host and is toxic to a range of insect larvae, making it of interest for biological pest control. S. nematodiphila carries genes encoding insecticidal toxins, chitinases, and secondary metabolites that contribute to its entomopathogenic activity.
Derived from 263 genomes: 2 from RefSeq and 261 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 261 | 371,297 | 238,064 | 19,782 | 260,911 | 312,146 | 438,336 | 1,335,338 |
| no_of_contigs | non-normal | 261 | 92.3 | 92.3 | 21 | 52 | 71 | 81 | 582 |
| longest | non-normal | 261 | 818,261 | 438,183 | 88,498 | 544,621 | 724,685 | 1,035,968 | 2,493,872 |
| GC_Content | non-normal | 261 | 59.66 | 0.12 | 59.18 | 59.59 | 59.72 | 59.73 | 59.85 |
| Completeness_Specific | non-normal | 261 | 100 | 0 | 100 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 261 | 0.09 | 0.09 | 0.01 | 0.04 | 0.06 | 0.1 | 0.67 |
| Total_Coding_Sequences | non-normal | 261 | 4,772 | 144.04 | 4,590 | 4,687 | 4,705 | 4,815 | 5,358 |
| Genome_Size | non-normal | 261 | 5,118,136 | 78,367 | 4,939,194 | 5,068,891 | 5,081,597 | 5,171,638 | 5,457,290 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 263 genomes including 2 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.