Serratia bockelmannii is a Gram-negative, facultatively anaerobic rod of the family Yersiniaceae (order Enterobacterales), recently described as a novel species within the genus Serratia. It has been isolated from clinical and environmental sources, and like other members of the genus it may carry intrinsic resistance to several classes of antibiotics. S. bockelmannii is delineated from closely related serratiae by whole-genome average nucleotide identity and digital DNA-DNA hybridisation values.
Derived from 284 genomes: 6 from RefSeq and 278 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
Threshold values and rationale for Serratia bockelmannii (qualibact-v1.0) contributed by:
Nov 2025 expert-feedback survey
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 278 | 446,001 | 256,638 | 27,582 | 299,475 | 373,467 | 560,704 | 1,588,841 |
| no_of_contigs | non-normal | 278 | 59.4 | 38.9 | 22 | 39.25 | 51 | 62 | 355 |
| longest | non-normal | 278 | 1,011,900 | 496,017 | 105,623 | 645,847 | 895,254 | 1,337,878 | 2,606,310 |
| GC_Content | non-normal | 278 | 59.33 | 0.17 | 58.64 | 59.23 | 59.35 | 59.44 | 59.71 |
| Completeness_Specific | non-normal | 278 | 100 | 0 | 100 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 278 | 0.22 | 0.18 | 0.01 | 0.09 | 0.21 | 0.27 | 1.23 |
| Total_Coding_Sequences | non-normal | 278 | 4,805 | 120.35 | 4,548 | 4,707 | 4,797 | 4,877 | 5,317 |
| Genome_Size | non-normal | 278 | 5,205,301 | 109,080 | 4,967,849 | 5,121,234 | 5,192,977 | 5,277,237 | 5,586,847 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 284 genomes including 6 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.