Derived from 1,736 genomes: 1 from RefSeq and 1,735 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 1,735 | 230,584 | 90,068 | 53,277 | 149,070 | 224,846 | 310,774 | 490,150 |
| no_of_contigs | non-normal | 1,735 | 108.14 | 25.06 | 54 | 90 | 105 | 121 | 222 |
| longest | non-normal | 1,735 | 638,449 | 289,823 | 166,802 | 393,146 | 568,185 | 789,454 | 1,667,780 |
| GC_Content | non-normal | 1,735 | 51.42 | 0.07 | 51.06 | 51.37 | 51.42 | 51.47 | 51.63 |
| Completeness_Specific | non-normal | 1,735 | 100 | 0 | 100 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 1,735 | 0.06 | 0.04 | 0 | 0.03 | 0.05 | 0.07 | 0.41 |
| Total_Coding_Sequences | non-normal | 1,735 | 4,327 | 107.52 | 4,053 | 4,247 | 4,304 | 4,395 | 4,697 |
| Genome_Size | non-normal | 1,735 | 4,564,916 | 81,972 | 4,334,723 | 4,501,048 | 4,546,962 | 4,616,922 | 4,899,226 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 1,736 genomes including 1 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.