Derived from 100 genomes: 9 from RefSeq and 91 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 91 | 79,332 | 22,378 | 45,280 | 63,261 | 75,383 | 89,069 | 184,643 |
| no_of_contigs | normal | 91 | 239.14 | 46.61 | 131 | 207 | 234 | 274.5 | 364 |
| longest | normal | 91 | 296,582 | 76,227 | 153,074 | 241,157 | 295,784 | 337,066 | 484,428 |
| GC_Content | normal | 91 | 62.22 | 0.17 | 61.84 | 62.09 | 62.19 | 62.34 | 62.65 |
| Completeness_Specific | non-normal | 91 | 99.99 | 0.02 | 99.92 | 99.99 | 99.99 | 100 | 100 |
| Contamination | non-normal | 91 | 0.61 | 0.36 | 0.07 | 0.34 | 0.51 | 0.85 | 1.46 |
| Total_Coding_Sequences | normal | 91 | 5,385 | 220.47 | 4,891 | 5,259 | 5,364 | 5,539 | 5,831 |
| Genome_Size | normal | 91 | 5,738,955 | 186,887 | 5,315,432 | 5,624,517 | 5,735,912 | 5,851,792 | 6,254,515 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 100 genomes including 9 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.