Derived from 187 genomes: 1 from RefSeq and 186 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | normal | 186 | 290,544 | 69,598 | 118,458 | 243,768 | 306,806 | 327,633 | 543,970 |
| no_of_contigs | non-normal | 186 | 81.55 | 23.83 | 53 | 62.25 | 75.5 | 93 | 195 |
| longest | normal | 186 | 628,373 | 142,049 | 323,804 | 527,342 | 676,422 | 741,695 | 1,016,079 |
| GC_Content | non-normal | 186 | 60.56 | 0.01 | 60.54 | 60.55 | 60.55 | 60.56 | 60.58 |
| Completeness_Specific | non-normal | 186 | 100 | 0 | 99.99 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 186 | 2.01 | 0.04 | 1.91 | 2.01 | 2.01 | 2.01 | 2.33 |
| Total_Coding_Sequences | non-normal | 186 | 5,763 | 11.04 | 5,746 | 5,755 | 5,759 | 5,767 | 5,809 |
| Genome_Size | non-normal | 186 | 6,406,382 | 6,346 | 6,392,998 | 6,402,214 | 6,403,187 | 6,411,498 | 6,429,952 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 187 genomes including 1 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.