Derived from 114 genomes: 3 from RefSeq and 111 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 111 | 136,967 | 61,696 | 33,378 | 84,972 | 121,024 | 173,463 | 346,305 |
| no_of_contigs | non-normal | 111 | 59.46 | 18.9 | 22 | 47.5 | 56 | 68 | 143 |
| longest | non-normal | 111 | 318,289 | 108,983 | 106,316 | 231,249 | 320,424 | 368,467 | 652,475 |
| GC_Content | normal | 111 | 49.2 | 0.15 | 48.8 | 49.12 | 49.2 | 49.34 | 49.44 |
| Completeness_Specific | non-normal | 111 | 100 | 0 | 100 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 111 | 0.13 | 0.17 | 0 | 0.05 | 0.06 | 0.1 | 0.73 |
| Total_Coding_Sequences | non-normal | 111 | 2,214 | 85.59 | 2,009 | 2,134 | 2,224 | 2,281 | 2,381 |
| Genome_Size | non-normal | 111 | 2,278,117 | 69,948 | 2,150,355 | 2,207,476 | 2,276,135 | 2,339,369 | 2,420,314 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 114 genomes including 3 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.