Derived from 110 genomes. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 110 | 240,807 | 105,773 | 96,908 | 176,572 | 226,862 | 275,666 | 556,109 |
| no_of_contigs | non-normal | 110 | 44.4 | 19.4 | 10 | 34 | 44 | 50.75 | 91 |
| longest | non-normal | 110 | 551,783 | 221,359 | 198,134 | 365,237 | 590,482 | 759,858 | 1,018,560 |
| GC_Content | non-normal | 110 | 51.84 | 0.17 | 51.59 | 51.74 | 51.77 | 51.85 | 52.22 |
| Completeness_Specific | normal | 110 | 99.99 | 0.01 | 99.97 | 99.99 | 99.99 | 99.99 | 100 |
| Contamination | non-normal | 110 | 0.03 | 0.02 | 0.01 | 0.01 | 0.02 | 0.03 | 0.11 |
| Total_Coding_Sequences | normal | 110 | 1,987 | 69.37 | 1,860 | 1,967 | 1,984 | 2,032 | 2,194 |
| Genome_Size | normal | 110 | 2,104,207 | 54,826 | 1,998,115 | 2,097,506 | 2,112,509 | 2,132,003 | 2,250,623 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 110 genomes
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.