Derived from 4 genomes: 2 from RefSeq and 2 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for REFSEQ-QC-v1.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | insufficient_data | 2 | 88,219 | 0 | 88,219 | 88,219 | 88,219 | 88,219 | 88,219 |
| no_of_contigs | insufficient_data | 2 | 156 | 0 | 156 | 156 | 156 | 156 | 156 |
| longest | insufficient_data | 2 | 364,228 | 0 | 364,228 | 364,228 | 364,228 | 364,228 | 364,228 |
| GC_Content | insufficient_data | 2 | 65.9 | 0 | 65.9 | 65.9 | 65.9 | 65.9 | 65.9 |
| Completeness_Specific | insufficient_data | 2 | 99.93 | 0.01 | 99.92 | 99.92 | 99.93 | 99.93 | 99.93 |
| Contamination | insufficient_data | 2 | 1.19 | 0 | 1.19 | 1.19 | 1.19 | 1.19 | 1.19 |
| Total_Coding_Sequences | insufficient_data | 2 | 4,814 | 0 | 4,814 | 4,814 | 4,814 | 4,814 | 4,814 |
| Genome_Size | insufficient_data | 2 | 4,761,540 | 71 | 4,761,469 | 4,761,505 | 4,761,540 | 4,761,576 | 4,761,611 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 4 genomes including 2 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.