Derived from 1,077 genomes: 8 from RefSeq and 1,069 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 1,069 | 35,868 | 10,025 | 21,056 | 26,740 | 30,477 | 45,319 | 86,982 |
| no_of_contigs | non-normal | 1,069 | 392.72 | 96.45 | 270 | 298 | 389 | 464 | 643 |
| longest | non-normal | 1,069 | 127,472 | 33,276 | 74,455 | 103,140 | 111,037 | 159,854 | 267,140 |
| GC_Content | non-normal | 1,069 | 65.63 | 0.07 | 65.47 | 65.57 | 65.64 | 65.7 | 65.79 |
| Completeness_Specific | non-normal | 1,069 | 99.99 | 0.01 | 99.93 | 99.98 | 99.98 | 99.99 | 100 |
| Contamination | non-normal | 1,069 | 0.59 | 0.23 | 0.07 | 0.51 | 0.55 | 0.57 | 2.06 |
| Total_Coding_Sequences | non-normal | 1,069 | 5,425 | 221.15 | 5,236 | 5,277 | 5,346 | 5,402 | 6,060 |
| Genome_Size | non-normal | 1,069 | 5,373,755 | 174,866 | 5,213,178 | 5,319,340 | 5,329,424 | 5,350,556 | 6,442,970 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 1,077 genomes including 8 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.