Derived from 656 genomes: 3 from RefSeq and 653 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 653 | 117,020 | 47,462 | 27,762 | 83,138 | 105,649 | 146,382 | 264,878 |
| no_of_contigs | non-normal | 653 | 231.32 | 64.93 | 116 | 190 | 216 | 249 | 522 |
| longest | non-normal | 653 | 416,882 | 174,440 | 120,780 | 285,931 | 373,447 | 569,102 | 919,824 |
| GC_Content | non-normal | 653 | 66.15 | 0.06 | 65.94 | 66.12 | 66.16 | 66.19 | 66.25 |
| Completeness_Specific | non-normal | 653 | 99.99 | 0.01 | 99.96 | 99.99 | 100 | 100 | 100 |
| Contamination | non-normal | 653 | 0.17 | 0.31 | 0.01 | 0.03 | 0.05 | 0.07 | 1.88 |
| Total_Coding_Sequences | non-normal | 653 | 5,899 | 114.62 | 5,672 | 5,812 | 5,873 | 5,966 | 6,397 |
| Genome_Size | non-normal | 653 | 6,486,673 | 103,116 | 6,303,319 | 6,414,679 | 6,453,738 | 6,550,373 | 6,901,612 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 656 genomes including 3 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.