Derived from 122 genomes: 1 from RefSeq and 121 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 121 | 310,530 | 180,243 | 47,094 | 157,087 | 273,815 | 419,134 | 899,627 |
| no_of_contigs | non-normal | 121 | 88.73 | 45.86 | 33 | 54 | 80 | 105 | 242 |
| longest | non-normal | 121 | 701,106 | 330,081 | 135,728 | 414,595 | 674,812 | 908,639 | 1,553,817 |
| GC_Content | normal | 121 | 50.58 | 0.11 | 50.35 | 50.51 | 50.58 | 50.66 | 50.88 |
| Completeness_Specific | non-normal | 121 | 100 | 0 | 100 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 121 | 0.26 | 0.22 | 0 | 0.1 | 0.22 | 0.33 | 1.13 |
| Total_Coding_Sequences | non-normal | 121 | 4,316 | 187.04 | 3,986 | 4,175 | 4,275 | 4,444 | 4,989 |
| Genome_Size | non-normal | 121 | 4,600,689 | 144,764 | 4,349,338 | 4,489,050 | 4,570,633 | 4,710,020 | 5,057,165 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 122 genomes including 1 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.