Derived from 182 genomes: 6 from RefSeq and 176 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 176 | 137,228 | 49,432 | 72,481 | 106,751 | 116,902 | 153,697 | 333,550 |
| no_of_contigs | non-normal | 176 | 145.06 | 48.56 | 55 | 105.25 | 143.5 | 181.25 | 320 |
| longest | non-normal | 176 | 351,510 | 90,016 | 157,500 | 298,130 | 328,757 | 393,281 | 614,253 |
| GC_Content | non-normal | 176 | 43.64 | 0.27 | 43.17 | 43.32 | 43.71 | 43.83 | 44.43 |
| Completeness_Specific | non-normal | 176 | 100 | 0 | 100 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 176 | 2.62 | 0.54 | 1.67 | 2.4 | 2.41 | 2.76 | 5.01 |
| Total_Coding_Sequences | non-normal | 176 | 4,340 | 267.05 | 3,843 | 4,103 | 4,390 | 4,434 | 5,043 |
| Genome_Size | non-normal | 176 | 4,387,805 | 224,961 | 4,009,156 | 4,230,271 | 4,376,581 | 4,514,330 | 4,962,556 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 182 genomes including 6 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.