Derived from 95 genomes. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 95 | 278,961 | 220,347 | 21,817 | 125,671 | 205,868 | 341,778 | 875,289 |
| no_of_contigs | non-normal | 95 | 86.68 | 48.9 | 30 | 54 | 74 | 102 | 354 |
| longest | non-normal | 95 | 690,072 | 386,638 | 70,450 | 334,248 | 621,230 | 940,768 | 1,699,017 |
| GC_Content | normal | 95 | 27.2 | 0.05 | 27.11 | 27.15 | 27.19 | 27.24 | 27.34 |
| Completeness_Specific | non-normal | 95 | 99.99 | 0.01 | 99.96 | 99.99 | 99.99 | 100 | 100 |
| Contamination | normal | 95 | 0.22 | 0.09 | 0 | 0.15 | 0.21 | 0.29 | 0.54 |
| Total_Coding_Sequences | non-normal | 95 | 3,625 | 151.43 | 3,305 | 3,514 | 3,567 | 3,756 | 3,939 |
| Genome_Size | non-normal | 95 | 3,878,076 | 97,194 | 3,681,070 | 3,807,017 | 3,845,163 | 3,965,515 | 4,059,015 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 95 genomes
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.