Derived from 182 genomes: 7 from RefSeq and 175 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 175 | 182,758 | 113,535 | 27,247 | 114,041 | 126,545 | 219,338 | 578,190 |
| no_of_contigs | normal | 175 | 203.21 | 106.55 | 45 | 97 | 235 | 295 | 594 |
| longest | non-normal | 175 | 566,759 | 265,304 | 196,990 | 396,956 | 420,095 | 716,976 | 1,524,538 |
| GC_Content | non-normal | 175 | 35.2 | 0.11 | 34.9 | 35.13 | 35.24 | 35.26 | 35.39 |
| Completeness_Specific | non-normal | 175 | 100 | 0 | 99.99 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 175 | 0.15 | 0.17 | 0 | 0.08 | 0.11 | 0.17 | 1.67 |
| Total_Coding_Sequences | non-normal | 175 | 5,951 | 280.01 | 5,281 | 5,752 | 6,034 | 6,125 | 6,459 |
| Genome_Size | non-normal | 175 | 5,741,803 | 214,478 | 5,256,217 | 5,617,364 | 5,788,963 | 5,844,060 | 6,136,866 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 182 genomes including 7 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.