Derived from 132 genomes: 2 from RefSeq and 130 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 130 | 71,443 | 60,928 | 16,108 | 31,075 | 47,044 | 88,384 | 297,842 |
| no_of_contigs | normal | 130 | 349.91 | 175.93 | 75 | 199.5 | 343.5 | 461.75 | 865 |
| longest | non-normal | 130 | 303,055 | 172,480 | 111,947 | 178,297 | 237,519 | 387,171 | 796,858 |
| GC_Content | non-normal | 130 | 35.36 | 0.1 | 35.15 | 35.28 | 35.36 | 35.44 | 35.56 |
| Completeness_Specific | non-normal | 130 | 100 | 0 | 100 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 130 | 0.44 | 0.45 | 0 | 0.06 | 0.19 | 0.77 | 1.6 |
| Total_Coding_Sequences | normal | 130 | 5,870 | 207 | 5,346 | 5,728 | 5,881 | 5,989 | 6,259 |
| Genome_Size | normal | 130 | 5,726,008 | 172,504 | 5,283,242 | 5,624,349 | 5,729,354 | 5,837,301 | 6,024,023 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 132 genomes including 2 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.