Derived from 533 genomes: 2 from RefSeq and 531 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 531 | 137,428 | 139,374 | 10,586 | 55,949 | 72,633 | 186,568 | 790,747 |
| no_of_contigs | non-normal | 531 | 367.08 | 254.4 | 47 | 150.5 | 342 | 472 | 1,477 |
| longest | non-normal | 531 | 426,466 | 307,840 | 77,112 | 223,009 | 281,050 | 578,163 | 1,529,820 |
| GC_Content | non-normal | 531 | 34.85 | 0.12 | 34.63 | 34.74 | 34.82 | 34.93 | 35.24 |
| Completeness_Specific | non-normal | 531 | 100 | 0 | 99.98 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 531 | 0.07 | 0.14 | 0 | 0 | 0 | 0.08 | 0.88 |
| Total_Coding_Sequences | non-normal | 531 | 6,356 | 477.97 | 5,232 | 5,963 | 6,526 | 6,743 | 7,334 |
| Genome_Size | non-normal | 531 | 6,135,643 | 346,921 | 5,221,375 | 5,866,920 | 6,255,878 | 6,429,214 | 6,676,494 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 533 genomes including 2 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.