Vibrio diabolicus is a Gram-negative, facultatively anaerobic, curved rod of the family Vibrionaceae, originally isolated from a polychaete annelid near deep-sea hydrothermal vents on the East Pacific Rise. It is notable for producing a novel exopolysaccharide (HE800) with structural similarities to hyaluronic acid, which has biomedical applications in bone and tissue regeneration. V. diabolicus has a bipartite genome typical of vibrios and carries genes for thermotolerance and heavy-metal resistance reflecting its extreme-environment origin.
Derived from 143 genomes: 10 from RefSeq and 133 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 133 | 469,629 | 200,397 | 103,122 | 348,107 | 435,964 | 611,711 | 914,336 |
| no_of_contigs | normal | 133 | 89.14 | 23.18 | 45 | 74 | 86 | 103 | 152 |
| longest | non-normal | 133 | 934,027 | 357,786 | 218,258 | 711,109 | 870,922 | 1,082,110 | 1,905,736 |
| GC_Content | normal | 133 | 44.8 | 0.08 | 44.58 | 44.76 | 44.81 | 44.85 | 44.95 |
| Completeness_Specific | non-normal | 133 | 100 | 0 | 99.99 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 133 | 0.04 | 0.06 | 0 | 0 | 0.02 | 0.06 | 0.42 |
| Total_Coding_Sequences | normal | 133 | 4,659 | 98.02 | 4,448 | 4,594 | 4,651 | 4,725 | 4,935 |
| Genome_Size | non-normal | 133 | 5,151,594 | 92,466 | 4,972,742 | 5,086,187 | 5,129,935 | 5,206,857 | 5,428,759 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 143 genomes including 10 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.