Pseudomonas fulva is a Gram-negative, aerobic rod in the family Pseudomonadaceae, typically isolated from soil, water, and plant-associated environments. Although primarily considered an environmental organism, P. fulva has been reported as a rare opportunistic pathogen causing bloodstream infections and peritonitis in immunocompromised individuals. Its genome is moderately sized for a pseudomonad and includes metabolic versatility typical of the P. putida group, to which it is phylogenetically related.
Derived from 122 genomes: 17 from RefSeq and 105 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | normal | 105 | 229,642 | 58,679 | 118,662 | 182,560 | 245,948 | 269,014 | 408,711 |
| no_of_contigs | non-normal | 105 | 90.55 | 25.84 | 52 | 74 | 82 | 103 | 209 |
| longest | non-normal | 105 | 610,253 | 119,285 | 299,750 | 577,334 | 657,630 | 693,515 | 705,699 |
| GC_Content | non-normal | 105 | 61.43 | 0.23 | 61.22 | 61.22 | 61.32 | 61.62 | 61.99 |
| Completeness_Specific | non-normal | 105 | 100 | 0 | 100 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 105 | 0.33 | 0.25 | 0.05 | 0.15 | 0.3 | 0.3 | 1.18 |
| Total_Coding_Sequences | non-normal | 105 | 4,659 | 214.03 | 4,215 | 4,461 | 4,791 | 4,797 | 5,029 |
| Genome_Size | non-normal | 105 | 5,103,417 | 196,314 | 4,712,474 | 4,927,703 | 5,235,840 | 5,236,777 | 5,381,893 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 122 genomes including 17 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.