QC Scheme: qualibact-v1.0 for Corynebacterium striatum

Derived from 372 genomes: 6 from RefSeq and 366 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.

Summary table

This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.

A combined summary table across all species is available on the summary page.

summary.csv

Show summary statistics inline

Metric	Distribution	n	Mean	SD	Min	Q1	Median	Q3	Max
N50	non-normal	366	110,999	22,835	49,081	95,033	107,854	125,049	194,799
no_of_contigs	non-normal	366	173.11	43.83	87	144.25	165	206.75	338
longest	non-normal	366	264,146	50,608	145,763	221,823	263,522	290,378	450,195
GC_Content	non-normal	366	59.25	0.09	58.95	59.19	59.27	59.3	59.42
Completeness_Specific	non-normal	366	99.95	0.22	97.33	99.99	99.99	100	100
Contamination	non-normal	366	0.64	0.51	0.01	0.29	0.53	0.77	3.09
Total_Coding_Sequences	non-normal	366	2,797	140.99	2,460	2,688	2,762	2,909	3,113
Genome_Size	non-normal	366	2,874,119	89,167	2,624,526	2,807,939	2,857,178	2,937,549	3,080,425

Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.

Suggested thresholds for Corynebacterium striatum (qualibact-v1.0)

Derived from 372 genomes including 6 RefSeq references

Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.

Metric	Fail below	Warn below	Warn above	Fail above
Genome_Size	-	-	-	-
GC_Content	-	-	-	-
Total_Coding_Sequences	-	-	-	-
Completeness_Specific	-	-	-	-
Contamination	-	-	-	-
N50	-	-	-	-
no_of_contigs	-	-	-	-
longest	-	-	-	-

How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.