QC Scheme: qualibact-v1.0 for Burkholderia dolosa

Derived from 803 genomes: 6 from RefSeq and 797 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.

Summary table

This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.

A combined summary table across all species is available on the summary page.

summary.csv

Show summary statistics inline

Metric	Distribution	n	Mean	SD	Min	Q1	Median	Q3	Max
N50	non-normal	797	122,347	75,990	16,990	49,861	100,858	211,708	287,290
no_of_contigs	non-normal	797	232.53	147.35	74	113	180	315	776
longest	non-normal	797	348,394	166,865	84,471	191,572	281,653	521,526	581,739
GC_Content	non-normal	797	67.07	0.02	66.99	67.06	67.07	67.09	67.11
Completeness_Specific	non-normal	797	100	0	100	100	100	100	100
Contamination	non-normal	797	0.67	0.28	0.47	0.56	0.57	0.75	2.27
Total_Coding_Sequences	non-normal	797	5,733	112.03	5,560	5,664	5,707	5,801	6,130
Genome_Size	non-normal	797	6,327,136	27,597	6,225,958	6,292,852	6,341,028	6,348,895	6,383,992

Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.

Suggested thresholds for Burkholderia dolosa (qualibact-v1.0)

Derived from 803 genomes including 6 RefSeq references

Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.

Metric	Fail below	Warn below	Warn above	Fail above
Genome_Size	-	-	-	-
GC_Content	-	-	-	-
Total_Coding_Sequences	-	-	-	-
Completeness_Specific	-	-	-	-
Contamination	-	-	-	-
N50	-	-	-	-
no_of_contigs	-	-	-	-
longest	-	-	-	-

How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.