Borreliella garinii is a Gram-negative spirochaete of the family Borreliaceae and a major causative agent of Lyme borreliosis in Europe and Asia. It displays a strong neurotropism and is the genospecies most frequently associated with Lyme neuroborreliosis. Like other members of the Borreliella burgdorferi sensu lato complex, B. garinii carries a segmented genome with a linear chromosome and multiple linear and circular plasmids, and it shows high genetic diversity among outer surface protein genes involved in host and vector adaptation.
Derived from 208 genomes: 8 from RefSeq and 200 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 200 | 192,404 | 112,480 | 11,436 | 130,426 | 213,045 | 222,736 | 692,888 |
| no_of_contigs | non-normal | 200 | 112.5 | 81.61 | 21 | 55.5 | 84 | 149.5 | 526 |
| longest | normal | 200 | 361,422 | 133,471 | 40,691 | 273,961 | 404,768 | 463,600 | 692,888 |
| GC_Content | non-normal | 200 | 27.9 | 0.19 | 27.42 | 27.78 | 27.87 | 27.98 | 28.98 |
| Completeness_Specific | normal | 200 | 96.36 | 1.33 | 92.15 | 95.47 | 96 | 97.32 | 99.6 |
| Contamination | non-normal | 200 | 0.61 | 0.27 | 0.26 | 0.48 | 0.55 | 0.66 | 2.86 |
| Total_Coding_Sequences | non-normal | 200 | 1,304 | 134.3 | 1,007 | 1,216 | 1,281 | 1,377 | 1,804 |
| Genome_Size | normal | 200 | 1,288,767 | 80,232 | 1,059,232 | 1,244,728 | 1,288,954 | 1,346,544 | 1,465,786 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 208 genomes including 8 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.