QC Scheme: qualibact-v1.0 for Bacteroides stercoris

Derived from 166 genomes: 3 from RefSeq and 163 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.

Summary table

This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.

A combined summary table across all species is available on the summary page.

summary.csv

Show summary statistics inline

Metric	Distribution	n	Mean	SD	Min	Q1	Median	Q3	Max
N50	non-normal	163	116,813	74,940	21,426	80,511	107,988	117,561	507,584
no_of_contigs	non-normal	163	143.07	64.28	37	106	122	160.5	436
longest	non-normal	163	310,512	138,514	91,548	245,000	268,799	342,500	821,640
GC_Content	normal	163	45.96	0.18	45.54	45.87	45.98	46.02	46.46
Completeness_Specific	non-normal	163	99.17	1.13	93.24	99.16	99.41	99.87	99.99
Contamination	non-normal	163	0.52	0.54	0.06	0.17	0.33	0.67	4.15
Total_Coding_Sequences	non-normal	163	3,415	258.93	2,821	3,204	3,348	3,587	4,143
Genome_Size	non-normal	163	3,929,635	217,037	3,433,716	3,766,212	3,909,953	4,081,995	4,600,004

Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.

Suggested thresholds for Bacteroides stercoris (qualibact-v1.0)

Derived from 166 genomes including 3 RefSeq references

Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.

Metric	Fail below	Warn below	Warn above	Fail above
Genome_Size	-	-	-	-
GC_Content	-	-	-	-
Total_Coding_Sequences	-	-	-	-
Completeness_Specific	-	-	-	-
Contamination	-	-	-	-
N50	-	-	-	-
no_of_contigs	-	-	-	-
longest	-	-	-	-

How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.