QC Scheme: qualibact-v1.0 for Bacteroides cellulosilyticus

Derived from 208 genomes: 5 from RefSeq and 203 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.

Summary table

This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.

A combined summary table across all species is available on the summary page.

summary.csv

Show summary statistics inline

Metric	Distribution	n	Mean	SD	Min	Q1	Median	Q3	Max
N50	non-normal	203	291,007	154,222	28,256	178,217	292,850	386,106	1,022,549
no_of_contigs	non-normal	203	122.04	87.23	33	71	87	137.5	502
longest	non-normal	203	730,203	334,883	95,661	514,794	722,212	916,518	2,164,143
GC_Content	normal	203	42.85	0.18	42.43	42.71	42.84	42.97	43.38
Completeness_Specific	non-normal	203	99.96	0.05	99.57	99.94	99.97	99.99	100
Contamination	non-normal	203	1.24	0.58	0.36	0.81	1.1	1.46	3.17
Total_Coding_Sequences	non-normal	203	5,448	240.71	4,954	5,260	5,435	5,618	6,351
Genome_Size	normal	203	7,027,866	216,167	6,580,548	6,877,659	6,987,176	7,196,209	7,611,306

Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.

Suggested thresholds for Bacteroides cellulosilyticus (qualibact-v1.0)

Derived from 208 genomes including 5 RefSeq references

Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.

Metric	Fail below	Warn below	Warn above	Fail above
Genome_Size	-	-	-	-
GC_Content	-	-	-	-
Total_Coding_Sequences	-	-	-	-
Completeness_Specific	-	-	-	-
Contamination	-	-	-	-
N50	-	-	-	-
no_of_contigs	-	-	-	-
longest	-	-	-	-

How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.