Derived from 97 genomes: 7 from RefSeq and 90 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.
This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.
A combined summary table across all species is available on the summary page.
| Metric | Distribution | n | Mean | SD | Min | Q1 | Median | Q3 | Max |
|---|---|---|---|---|---|---|---|---|---|
| N50 | non-normal | 90 | 200,357 | 99,519 | 42,500 | 128,851 | 176,619 | 266,744 | 406,444 |
| no_of_contigs | non-normal | 90 | 70.68 | 37.01 | 24 | 42.25 | 59 | 83 | 192 |
| longest | normal | 90 | 416,682 | 134,563 | 113,824 | 350,418 | 391,897 | 526,208 | 795,307 |
| GC_Content | non-normal | 90 | 41.54 | 0.12 | 41.06 | 41.46 | 41.56 | 41.61 | 41.82 |
| Completeness_Specific | non-normal | 90 | 100 | 0 | 100 | 100 | 100 | 100 | 100 |
| Contamination | non-normal | 90 | 0.08 | 0.08 | 0 | 0.03 | 0.05 | 0.1 | 0.52 |
| Total_Coding_Sequences | normal | 90 | 3,020 | 124.88 | 2,735 | 2,938 | 3,008 | 3,097 | 3,383 |
| Genome_Size | normal | 90 | 3,198,580 | 105,510 | 2,984,176 | 3,132,794 | 3,184,193 | 3,260,503 | 3,496,618 |
Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.
Derived from 97 genomes including 7 RefSeq references
Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.
| Metric | Fail below | Warn below | Warn above | Fail above |
|---|---|---|---|---|
| Genome_Size | - | - | - | - |
| GC_Content | - | - | - | - |
| Total_Coding_Sequences | - | - | - | - |
| Completeness_Specific | - | - | - | - |
| Contamination | - | - | - | - |
| N50 | - | - | - | - |
| no_of_contigs | - | - | - | - |
| longest | - | - | - | - |
How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.