QC Scheme: qualibact-v1.0 for Acinetobacter baylyi

Derived from 245 genomes: 3 from RefSeq and 242 from other sources. For the derivation pipeline and the PASS / WARN / FAIL verdict model, see the methods page for qualibact-v1.0.

Summary table

This table summarises the distribution of each metric, including standard deviation, mean, median, and percentiles.

A combined summary table across all species is available on the summary page.

summary.csv

Show summary statistics inline

Metric	Distribution	n	Mean	SD	Min	Q1	Median	Q3	Max
N50	non-normal	242	303,014	152,688	14,417	200,920	296,781	426,071	792,728
no_of_contigs	non-normal	242	62.05	47.4	23	41	48.5	62	408
longest	non-normal	242	611,270	279,761	72,558	395,250	579,446	790,415	1,422,396
GC_Content	non-normal	242	40.36	0.05	40.1	40.34	40.36	40.37	40.64
Completeness_Specific	non-normal	242	99.99	0.01	99.96	99.99	99.99	99.99	100
Contamination	non-normal	242	0.11	0.13	0.02	0.05	0.07	0.11	1.18
Total_Coding_Sequences	non-normal	242	3,275	77.24	3,002	3,250	3,277	3,307	3,665
Genome_Size	non-normal	242	3,552,221	76,660	3,273,444	3,525,649	3,559,169	3,570,763	3,936,246

Full statistics including KS test vs RefSeq and Wasserstein distance are in the downloadable summary.csv.

Suggested thresholds for Acinetobacter baylyi (qualibact-v1.0)

Derived from 245 genomes including 3 RefSeq references

Both Fail and Warn bands shown as the published rounded values — easier to cite and consistent across the species page, CSV downloads, and downstream QC tools.

Metric	Fail below	Warn below	Warn above	Fail above
Genome_Size	-	-	-	-
GC_Content	-	-	-	-
Total_Coding_Sequences	-	-	-	-
Completeness_Specific	-	-	-	-
Contamination	-	-	-	-
N50	-	-	-	-
no_of_contigs	-	-	-	-
longest	-	-	-	-

How to read this: A value outside a failure limit fails QC. Within the failure limits, values beyond a warning limit are borderline and worth a manual look; values within the warning limits pass that criterion. A dash means that no bound is defined on that side.